Difference between revisions of "GeneNames"

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(New page: GeneNames are the most important link between genes ... Gscope has now following functions to manipulate the gene names. * HGNC integrates a download from the [http://www.genenames.org/...)
 
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GeneNames are the most important link between genes ...  
 
GeneNames are the most important link between genes ...  
  
Gscope has now following functions to manipulate the gene names.
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Gscope has now following functions to manipulate the gene names. See the test at below
  
 
* HGNC integrates a download from the [http://www.genenames.org/aboutHGNC.html HUGO Gene Nomenclature Committee]  
 
* HGNC integrates a download from the [http://www.genenames.org/aboutHGNC.html HUGO Gene Nomenclature Committee]  
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**MouseFromHuman Pax6 header (within  MouseFromHuman ListOf Header)
 
**MouseFromHuman Pax6 header (within  MouseFromHuman ListOf Header)
 
**MouseFromHuman Pax6 One_Genename (the most important)
 
**MouseFromHuman Pax6 One_Genename (the most important)
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==Test it==
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* get all about Pax6 in the [http://www-bio3d-igbmc.u-strasbg.fr/~ripp/cgi-bin/gscope_html_server.tcsh?UCSCGenomes&MGI&Pax6 Mouse] in the [Human
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Revision as of 17:54, 13 June 2008

GeneNames are the most important link between genes ...

Gscope has now following functions to manipulate the gene names. See the test at below

  • HGNC integrates a download from the HUGO Gene Nomenclature Committee
    • HGNC ListOf Header
    • HGNC ListOf HGNC_ID
    • HGNC ListOf GeneName
    • HGNC ListOf Synonym
    • HGNC ListOf SynoTxt
    • HGNC Pax6
    • HGNC Pax6 header (within HGNC ListOf Header)
  • MGI integrates a download from Mouse Genome Informatics concerning the gene alias for the mouse
    • MGI ListOf Header
    • MGI ListOf MGIID
    • MGI ListOf GeneName
    • MGI Pax6
    • MGI Pax6 header (within HGNC ListOf Header)
  • MGIHGNC integrates a download from Mouse Genome Informatics concerning the ortholgy between Mouse and Human
    • MGIHGNC ListOf Header
    • MGIHGNC ListOf MGIID
    • MGIHGNC ListOf GeneName
    • MGIHGNC Pax6
    • MGIHGNC Pax6 header (within MGIHGNC ListOf Header)
  • MouseFromHuman combines these programs
    • MouseFromHuman ListOf Header
    • MouseFromHuman ListOf GeneName
  • HumanFromMouse combines these programs
    • FromHumanFromMouse ListOf Header
    • FromHumanFromMouse ListOf GeneName
    • FromHumanFromMouse Pax6
    • FromHumanFromMouse Pax6 header (within MouseFromHuman ListOf Header)
    • FromHumanFromMousePax6 One_Genename (the most important)
    • MouseFromHuman Pax6
    • MouseFromHuman Pax6 header (within MouseFromHuman ListOf Header)
    • MouseFromHuman Pax6 One_Genename (the most important)

Test it

  • get all about Pax6 in the Mouse in the [Human

]