Difference between revisions of "Gscope Project"
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A [[Gscope]] Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/''MyProject'') | A [[Gscope]] Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/''MyProject'') | ||
| − | + | /genomics/''MyProject'' | |
| − | + | ./beton | |
| − | + | ./beton/miniconfig | |
| − | + | ./fiches | |
| − | + | ./fiches/bornesdespabs | |
| − | + | ./fiches/lesgenomescomplets | |
| − | + | ./prottfa | |
| − | + | ./protembl | |
and/or | and/or | ||
| − | + | ./nuctfa | |
| − | + | ./pnucembl | |
and why not | and why not | ||
| − | + | ./blastp | |
| − | + | ./tblastn | |
| − | + | ./blastpMus_musculus | |
| − | + | ./blastpHomo_sapiens | |
| − | + | ./msf | |
| − | + | ./msfMus_musculus | |
etc. | etc. | ||
All these directories and files are automatically created by Gscope. | All these directories and files are automatically created by Gscope. | ||
Revision as of 12:39, 16 April 2009
A Gscope Project is a directory tree containing at least following files (supposing REPERTOIREDUGENOME is /genomics/MyProject)
/genomics/MyProject
./beton ./beton/miniconfig
./fiches ./fiches/bornesdespabs ./fiches/lesgenomescomplets
./prottfa ./protembl
and/or
./nuctfa ./pnucembl
and why not
./blastp ./tblastn ./blastpMus_musculus ./blastpHomo_sapiens
./msf ./msfMus_musculus
etc.
All these directories and files are automatically created by Gscope.
