Analysis Type:	PANTHER Overrepresentation Test (release 20160715)
Annotation Version and Release Date:	GO Ontology database  Released 2016-07-29
Analyzed List:	upload_1 (Saccharomyces cerevisiae)
Reference List:	Saccharomyces cerevisiae (all genes in database)
Bonferroni correction:	true
GO biological process complete	Saccharomyces cerevisiae - REFLIST (6728)	upload_1 (231)	upload_1 (expected)	upload_1 (over/under)	upload_1 (fold Enrichment)	upload_1 (P-value)
nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (GO:0034427)	17	10	.58	+	17.13	1.21E-06
nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (GO:0070478)	17	10	.58	+	17.13	1.21E-06
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay (GO:0043928)	18	10	.62	+	16.18	2.08E-06
nuclear-transcribed mRNA catabolic process, exonucleolytic (GO:0000291)	19	10	.65	+	15.33	3.46E-06
nuclear-transcribed mRNA catabolic process, non-stop decay (GO:0070481)	23	10	.79	+	12.66	2.07E-05
polyadenylation-dependent snoRNA 3'-end processing (GO:0071051)	15	6	.52	+	11.65	3.05E-02
polyadenylation-dependent mRNA catabolic process (GO:0071047)	15	6	.52	+	11.65	3.05E-02
nuclear polyadenylation-dependent mRNA catabolic process (GO:0071042)	15	6	.52	+	11.65	3.05E-02
U4 snRNA 3'-end processing (GO:0034475)	15	6	.52	+	11.65	3.05E-02
tRNA catabolic process (GO:0016078)	16	6	.55	+	10.92	4.37E-02
nuclear polyadenylation-dependent tRNA catabolic process (GO:0071038)	16	6	.55	+	10.92	4.37E-02
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (GO:0000288)	46	16	1.58	+	10.13	2.04E-08
nonfunctional rRNA decay (GO:0070651)	21	7	.72	+	9.71	1.92E-02
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (GO:0000184)	31	10	1.06	+	9.40	3.23E-04
nuclear RNA surveillance (GO:0071027)	30	8	1.03	+	7.77	2.23E-02
regulation of autophagy (GO:0010506)	30	8	1.03	+	7.77	2.23E-02
positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)	45	11	1.55	+	7.12	1.18E-03
RNA surveillance (GO:0071025)	33	8	1.13	+	7.06	4.37E-02
regulation of transcription elongation from RNA polymerase II promoter (GO:0034243)	48	11	1.65	+	6.67	2.20E-03
positive regulation of DNA-templated transcription, elongation (GO:0032786)	49	11	1.68	+	6.54	2.68E-03
regulation of DNA-templated transcription, elongation (GO:0032784)	52	11	1.79	+	6.16	4.71E-03
nuclear-transcribed mRNA catabolic process (GO:0000956)	104	20	3.57	+	5.60	1.71E-06
mRNA catabolic process (GO:0006402)	106	20	3.64	+	5.50	2.36E-06
chromatin assembly or disassembly (GO:0006333)	66	12	2.27	+	5.30	7.64E-03
RNA catabolic process (GO:0006401)	130	20	4.46	+	4.48	6.79E-05
nucleobase-containing compound catabolic process (GO:0034655)	148	22	5.08	+	4.33	2.50E-05
heterocycle catabolic process (GO:0046700)	172	24	5.91	+	4.06	1.75E-05
cellular nitrogen compound catabolic process (GO:0044270)	173	24	5.94	+	4.04	1.95E-05
aromatic compound catabolic process (GO:0019439)	167	23	5.73	+	4.01	4.59E-05
organic cyclic compound catabolic process (GO:1901361)	178	24	6.11	+	3.93	3.33E-05
transcription from RNA polymerase II promoter (GO:0006366)	148	18	5.08	+	3.54	9.08E-03
protein-DNA complex subunit organization (GO:0071824)	159	18	5.46	+	3.30	2.37E-02
mRNA metabolic process (GO:0016071)	302	32	10.37	+	3.09	3.67E-05
positive regulation of RNA biosynthetic process (GO:1902680)	315	31	10.82	+	2.87	3.18E-04
positive regulation of transcription, DNA-templated (GO:0045893)	315	31	10.82	+	2.87	3.18E-04
positive regulation of nucleic acid-templated transcription (GO:1903508)	315	31	10.82	+	2.87	3.18E-04
positive regulation of RNA metabolic process (GO:0051254)	324	31	11.12	+	2.79	5.82E-04
positive regulation of transcription from RNA polymerase II promoter (GO:0045944)	269	25	9.24	+	2.71	1.47E-02
chromatin organization (GO:0006325)	324	30	11.12	+	2.70	1.80E-03
regulation of transcription from RNA polymerase II promoter (GO:0006357)	422	39	14.49	+	2.69	3.49E-05
positive regulation of nucleobase-containing compound metabolic process (GO:0045935)	349	32	11.98	+	2.67	9.29E-04
positive regulation of cellular biosynthetic process (GO:0031328)	376	34	12.91	+	2.63	5.36E-04
positive regulation of biosynthetic process (GO:0009891)	379	34	13.01	+	2.61	6.43E-04
positive regulation of gene expression (GO:0010628)	360	32	12.36	+	2.59	1.81E-03
positive regulation of macromolecule biosynthetic process (GO:0010557)	363	32	12.46	+	2.57	2.16E-03
negative regulation of macromolecule biosynthetic process (GO:0010558)	314	27	10.78	+	2.50	2.49E-02
negative regulation of cellular macromolecule biosynthetic process (GO:2000113)	314	27	10.78	+	2.50	2.49E-02
positive regulation of nitrogen compound metabolic process (GO:0051173)	392	33	13.46	+	2.45	3.89E-03
positive regulation of cellular metabolic process (GO:0031325)	466	39	16.00	+	2.44	4.59E-04
positive regulation of metabolic process (GO:0009893)	472	39	16.21	+	2.41	6.34E-04
cellular macromolecule catabolic process (GO:0044265)	380	31	13.05	+	2.38	1.53E-02
macromolecule catabolic process (GO:0009057)	409	33	14.04	+	2.35	9.50E-03
regulation of RNA biosynthetic process (GO:2001141)	719	58	24.69	+	2.35	9.27E-07
regulation of transcription, DNA-templated (GO:0006355)	719	58	24.69	+	2.35	9.27E-07
regulation of nucleic acid-templated transcription (GO:1903506)	719	58	24.69	+	2.35	9.27E-07
positive regulation of macromolecule metabolic process (GO:0010604)	451	36	15.48	+	2.32	4.24E-03
positive regulation of biological process (GO:0048518)	591	47	20.29	+	2.32	9.59E-05
chromosome organization (GO:0051276)	531	42	18.23	+	2.30	6.61E-04
cellular catabolic process (GO:0044248)	569	45	19.54	+	2.30	2.31E-04
regulation of RNA metabolic process (GO:0051252)	736	58	25.27	+	2.30	2.23E-06
positive regulation of cellular process (GO:0048522)	576	45	19.78	+	2.28	3.26E-04
regulation of nucleobase-containing compound metabolic process (GO:0019219)	807	60	27.71	+	2.17	9.58E-06
regulation of gene expression (GO:0010468)	868	64	29.80	+	2.15	3.36E-06
regulation of cellular macromolecule biosynthetic process (GO:2000112)	890	65	30.56	+	2.13	3.50E-06
catabolic process (GO:0009056)	658	48	22.59	+	2.12	8.70E-04
regulation of macromolecule biosynthetic process (GO:0010556)	897	65	30.80	+	2.11	4.79E-06
aromatic compound biosynthetic process (GO:0019438)	793	57	27.23	+	2.09	8.59E-05
heterocycle biosynthetic process (GO:0018130)	795	57	27.30	+	2.09	9.37E-05
regulation of cellular biosynthetic process (GO:0031326)	925	66	31.76	+	2.08	6.43E-06
regulation of biosynthetic process (GO:0009889)	928	66	31.86	+	2.07	7.33E-06
nucleobase-containing compound biosynthetic process (GO:0034654)	734	52	25.20	+	2.06	6.28E-04
negative regulation of cellular process (GO:0048523)	551	39	18.92	+	2.06	2.56E-02
organic substance catabolic process (GO:1901575)	651	46	22.35	+	2.06	3.81E-03
RNA biosynthetic process (GO:0032774)	571	40	19.60	+	2.04	2.47E-02
negative regulation of biological process (GO:0048519)	559	39	19.19	+	2.03	3.54E-02
regulation of nitrogen compound metabolic process (GO:0051171)	947	66	32.51	+	2.03	1.65E-05
organic cyclic compound biosynthetic process (GO:1901362)	838	58	28.77	+	2.02	2.33E-04
nucleic acid-templated transcription (GO:0097659)	567	39	19.47	+	2.00	4.86E-02
transcription, DNA-templated (GO:0006351)	567	39	19.47	+	2.00	4.86E-02
regulation of macromolecule metabolic process (GO:0060255)	1079	74	37.05	+	2.00	2.69E-06
RNA metabolic process (GO:0016070)	1186	81	40.72	+	1.99	3.47E-07
regulation of cellular metabolic process (GO:0031323)	1101	75	37.80	+	1.98	2.67E-06
regulation of primary metabolic process (GO:0080090)	1090	74	37.42	+	1.98	4.23E-06
regulation of metabolic process (GO:0019222)	1124	75	38.59	+	1.94	6.75E-06
macromolecular complex subunit organization (GO:0043933)	825	55	28.33	+	1.94	1.81E-03
nucleobase-containing compound metabolic process (GO:0006139)	1758	111	60.36	+	1.84	1.55E-09
nucleic acid metabolic process (GO:0090304)	1509	95	51.81	+	1.83	3.26E-07
heterocycle metabolic process (GO:0046483)	1830	115	62.83	+	1.83	5.31E-10
cellular aromatic compound metabolic process (GO:0006725)	1832	115	62.90	+	1.83	5.75E-10
organic cyclic compound metabolic process (GO:1901360)	1886	118	64.75	+	1.82	2.50E-10
regulation of cellular process (GO:0050794)	1577	91	54.14	+	1.68	9.37E-05
cellular component biogenesis (GO:0044085)	1077	62	36.98	+	1.68	3.78E-02
cellular nitrogen compound metabolic process (GO:0034641)	2124	122	72.93	+	1.67	3.66E-08
cellular nitrogen compound biosynthetic process (GO:0044271)	1176	67	40.38	+	1.66	2.13E-02
regulation of biological process (GO:0050789)	1626	92	55.83	+	1.65	1.97E-04
nitrogen compound metabolic process (GO:0006807)	2333	132	80.10	+	1.65	5.15E-09
gene expression (GO:0010467)	1448	81	49.72	+	1.63	3.09E-03
biosynthetic process (GO:0009058)	1775	98	60.94	+	1.61	1.86E-04
metabolic process (GO:0008152)	3521	194	120.89	+	1.60	8.21E-21
organic substance biosynthetic process (GO:1901576)	1738	95	59.67	+	1.59	5.69E-04
cellular biosynthetic process (GO:0044249)	1714	93	58.85	+	1.58	1.20E-03
cellular metabolic process (GO:0044237)	3281	178	112.65	+	1.58	2.23E-15
organic substance metabolic process (GO:0071704)	3375	181	115.88	+	1.56	1.91E-15
primary metabolic process (GO:0044238)	3185	169	109.35	+	1.55	2.67E-12
biological regulation (GO:0065007)	1904	100	65.37	+	1.53	1.57E-03
cellular macromolecule metabolic process (GO:0044260)	2443	128	83.88	+	1.53	5.24E-06
macromolecule metabolic process (GO:0043170)	2553	133	87.66	+	1.52	2.32E-06
single-organism cellular process (GO:0044763)	2847	138	97.75	+	1.41	1.44E-04
cellular process (GO:0009987)	4606	215	158.14	+	1.36	1.69E-16
single-organism process (GO:0044699)	3198	145	109.80	+	1.32	4.42E-03
biological_process (GO:0008150)	5929	231	203.57	+	1.13	4.01E-10