ATPG_HUMAN 2019

Gene Name ATPG

Description ATP synthase subunit gamma, mitochondrial

Length 298

9606

Sequence

>sp|P36542|ATPG_HUMAN ATP synthase subunit gamma, mitochondrial
MFSRAGVAGLSAWTLQPQWIQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD

Domains

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What is the source the Gene Ontology annotation?

The Gene Ontology annotations are retrieved from the EBI's QuickGO webservice. Further informations are available in the external data sources section

What is the quality of these annotations?

For now, all GO term annotations, regardless of their evidence code, are displayed. No quality filter are used to provide the widest possible range of annotations. You can check the labels near each annotation for evidence details: manually reviewed annotations are displayed in blue, while the automatic ones are in grey.

Help

What is the source the domain annotation?

The domain annotations are dynamically queried from the Interpro database, using EBI webservice.

The source of these annotations is represented by a color code (see legend). You can access the corresponding Uniprot entries in Interpro by clicking on the synthetic representation of each domain.

Help

What are the distances?

The distances shown here are Jaccard distances, which are adapted to binary profiles (presence/absence).

How are they computed?

Distances between two protein of a given species are computed on phylogenetic profile of each protein in model species of the considered database.

Threshold

The goal of this section is to provide proteins with similar distributions to the query, to that end, we set a maximum threshold at 0.4

Proteins with similar distribution in the three Life domains

Identifier

Description

Distance between phylogenetic profiles

ATPA_HUMAN

ATP synthase subunit alpha, mitochondrial

0.204

ATPB_HUMAN

ATP synthase subunit beta, mitochondrial

0.218

RF1ML_HUMAN

Peptide chain release factor 1-like, mitochondrial

0.250

EFTU_HUMAN

Elongation factor Tu, mitochondrial

0.256

CH60_HUMAN

60 kDa heat shock protein, mitochondrial

0.271

IF2M_HUMAN

Translation initiation factor IF-2, mitochondrial

0.279

EFGM_HUMAN

Elongation factor G, mitochondrial

0.283

RM03_HUMAN

39S ribosomal protein L3, mitochondrial

0.284

RM13_HUMAN

39S ribosomal protein L13, mitochondrial

0.284

GUF1_HUMAN

Translation factor GUF1, mitochondrial

0.290

RF1M_HUMAN

Peptide chain release factor 1, mitochondrial

0.295

KGUA_HUMAN

Guanylate kinase

0.297

CH10_HUMAN

10 kDa heat shock protein, mitochondrial

0.300

SYWM_HUMAN

Tryptophan--tRNA ligase, mitochondrial

0.300

MAP11_HUMAN

Methionine aminopeptidase 1

0.303

PLPHP_HUMAN

Pyridoxal phosphate homeostasis protein

0.305

SYYM_HUMAN

Tyrosine--tRNA ligase, mitochondrial

0.305

MTG2_HUMAN

Mitochondrial ribosome-associated GTPase 2

0.310

MOD5_HUMAN

tRNA dimethylallyltransferase

0.313

SYEM_HUMAN

Probable glutamate--tRNA ligase, mitochondrial

0.315

METK2_HUMAN

S-adenosylmethionine synthase isoform type-2

0.315

RPA2_HUMAN

DNA-directed RNA polymerase I subunit RPA2

0.316

RM04_HUMAN

39S ribosomal protein L4, mitochondrial

0.320

METK1_HUMAN

S-adenosylmethionine synthase isoform type-1

0.320

FOLC_HUMAN

Folylpolyglutamate synthase, mitochondrial

0.329

CLPB_HUMAN

Caseinolytic peptidase B protein homolog

0.335

RRP5_HUMAN

Protein RRP5 homolog

0.336

CLPX_HUMAN

ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

0.340

RPA1_HUMAN

DNA-directed RNA polymerase I subunit RPA1

0.340

RM17_HUMAN

39S ribosomal protein L17, mitochondrial

0.344

RT09_HUMAN

28S ribosomal protein S9, mitochondrial

0.344

RPE_HUMAN

Ribulose-phosphate 3-epimerase

0.345

TPIS_HUMAN

Triosephosphate isomerase

0.346

SYK_HUMAN

Lysine--tRNA ligase

0.348

RM02_HUMAN

39S ribosomal protein L2, mitochondrial

0.350

RM27_HUMAN

39S ribosomal protein L27, mitochondrial

0.353

OSGP2_HUMAN

Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial

0.353

G3P_HUMAN

Glyceraldehyde-3-phosphate dehydrogenase

0.354

AFG32_HUMAN

AFG3-like protein 2

0.355

OXSM_HUMAN

3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

0.359

GPD1L_HUMAN

Glycerol-3-phosphate dehydrogenase 1-like protein

0.362

RPEL1_HUMAN

Ribulose-phosphate 3-epimerase-like protein 1

0.366

GPDA_HUMAN

Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

0.366

CLPP_HUMAN

ATP-dependent Clp protease proteolytic subunit, mitochondrial

0.367

RPC1_HUMAN

DNA-directed RNA polymerase III subunit RPC1

0.369

DLDH_HUMAN

Dihydrolipoyl dehydrogenase, mitochondrial

0.369

MTU1_HUMAN

Mitochondrial tRNA-specific 2-thiouridylase 1

0.370

RT12_HUMAN

28S ribosomal protein S12, mitochondrial

0.371

ABCF3_HUMAN

ATP-binding cassette sub-family F member 3

0.373

GRP75_HUMAN

Stress-70 protein, mitochondrial

0.374

DNJA3_HUMAN

DnaJ homolog subfamily A member 3, mitochondrial

0.374

ACPM_HUMAN

Acyl carrier protein, mitochondrial

0.375

SYLM_HUMAN

Probable leucine--tRNA ligase, mitochondrial

0.375

TOP2B_HUMAN

DNA topoisomerase 2-beta

0.375

TKT_HUMAN

Transketolase

0.377

TOP2A_HUMAN

DNA topoisomerase 2-alpha

0.379

KAD2_HUMAN

Adenylate kinase 2, mitochondrial

0.383

ABCF2_HUMAN

ATP-binding cassette sub-family F member 2

0.383

PUR9_HUMAN

Bifunctional purine biosynthesis protein PURH

0.385

DCAKD_HUMAN

Dephospho-CoA kinase domain-containing protein

0.385

SYDM_HUMAN

Aspartate--tRNA ligase, mitochondrial

0.385

RT16_HUMAN

28S ribosomal protein S16, mitochondrial

0.389

EFTS_HUMAN

Elongation factor Ts, mitochondrial

0.389

RM11_HUMAN

39S ribosomal protein L11, mitochondrial

0.390

ASML_HUMAN

Probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein

0.390

GTPB3_HUMAN

tRNA modification GTPase GTPBP3, mitochondrial

0.392

SDHA_HUMAN

Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

0.397

IMDH1_HUMAN

Inosine-5-monophosphate dehydrogenase 1

0.397

PRPS1_HUMAN

Ribose-phosphate pyrophosphokinase 1

0.399

PURA1_HUMAN

Adenylosuccinate synthetase isozyme 1

0.400

Proteins with similar distribution in Eukaryota

Identifier

Description

Distance between phylogenetic profiles

ATPA_HUMAN

ATP synthase subunit alpha, mitochondrial

0.204

ATPB_HUMAN

ATP synthase subunit beta, mitochondrial

0.218

RF1ML_HUMAN

Peptide chain release factor 1-like, mitochondrial

0.250

EFTU_HUMAN

Elongation factor Tu, mitochondrial

0.256

CH60_HUMAN

60 kDa heat shock protein, mitochondrial

0.271

IF2M_HUMAN

Translation initiation factor IF-2, mitochondrial

0.279

EFGM_HUMAN

Elongation factor G, mitochondrial

0.283

RM03_HUMAN

39S ribosomal protein L3, mitochondrial

0.284

RM13_HUMAN

39S ribosomal protein L13, mitochondrial

0.284

GUF1_HUMAN

Translation factor GUF1, mitochondrial

0.290

RF1M_HUMAN

Peptide chain release factor 1, mitochondrial

0.295

KGUA_HUMAN

Guanylate kinase

0.297

CH10_HUMAN

10 kDa heat shock protein, mitochondrial

0.300

SYWM_HUMAN

Tryptophan--tRNA ligase, mitochondrial

0.300

MAP11_HUMAN

Methionine aminopeptidase 1

0.303

PLPHP_HUMAN

Pyridoxal phosphate homeostasis protein

0.305

SYYM_HUMAN

Tyrosine--tRNA ligase, mitochondrial

0.305

MTG2_HUMAN

Mitochondrial ribosome-associated GTPase 2

0.310

MOD5_HUMAN

tRNA dimethylallyltransferase

0.313

SYEM_HUMAN

Probable glutamate--tRNA ligase, mitochondrial

0.315

METK2_HUMAN

S-adenosylmethionine synthase isoform type-2

0.315

RPA2_HUMAN

DNA-directed RNA polymerase I subunit RPA2

0.316

RM04_HUMAN

39S ribosomal protein L4, mitochondrial

0.320

METK1_HUMAN

S-adenosylmethionine synthase isoform type-1

0.320

FOLC_HUMAN

Folylpolyglutamate synthase, mitochondrial

0.329

CLPB_HUMAN

Caseinolytic peptidase B protein homolog

0.335

RRP5_HUMAN

Protein RRP5 homolog

0.336

CLPX_HUMAN

ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial

0.340

RPA1_HUMAN

DNA-directed RNA polymerase I subunit RPA1

0.340

RM17_HUMAN

39S ribosomal protein L17, mitochondrial

0.344

RT09_HUMAN

28S ribosomal protein S9, mitochondrial

0.344

RPE_HUMAN

Ribulose-phosphate 3-epimerase

0.345

TPIS_HUMAN

Triosephosphate isomerase

0.346

SYK_HUMAN

Lysine--tRNA ligase

0.348

RM02_HUMAN

39S ribosomal protein L2, mitochondrial

0.350

RM27_HUMAN

39S ribosomal protein L27, mitochondrial

0.353

OSGP2_HUMAN

Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial

0.353

G3P_HUMAN

Glyceraldehyde-3-phosphate dehydrogenase

0.354

AFG32_HUMAN

AFG3-like protein 2

0.355

OXSM_HUMAN

3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

0.359

GPD1L_HUMAN

Glycerol-3-phosphate dehydrogenase 1-like protein

0.362

RPEL1_HUMAN

Ribulose-phosphate 3-epimerase-like protein 1

0.366

GPDA_HUMAN

Glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic

0.366

CLPP_HUMAN

ATP-dependent Clp protease proteolytic subunit, mitochondrial

0.367

RPC1_HUMAN

DNA-directed RNA polymerase III subunit RPC1

0.369

DLDH_HUMAN

Dihydrolipoyl dehydrogenase, mitochondrial

0.369

MTU1_HUMAN

Mitochondrial tRNA-specific 2-thiouridylase 1

0.370

RT12_HUMAN

28S ribosomal protein S12, mitochondrial

0.371

ABCF3_HUMAN

ATP-binding cassette sub-family F member 3

0.373

GRP75_HUMAN

Stress-70 protein, mitochondrial

0.374

DNJA3_HUMAN

DnaJ homolog subfamily A member 3, mitochondrial

0.374

ACPM_HUMAN

Acyl carrier protein, mitochondrial

0.375

SYLM_HUMAN

Probable leucine--tRNA ligase, mitochondrial

0.375

TOP2B_HUMAN

DNA topoisomerase 2-beta

0.375

TKT_HUMAN

Transketolase

0.377

TOP2A_HUMAN

DNA topoisomerase 2-alpha

0.379

KAD2_HUMAN

Adenylate kinase 2, mitochondrial

0.383

ABCF2_HUMAN

ATP-binding cassette sub-family F member 2

0.383

PUR9_HUMAN

Bifunctional purine biosynthesis protein PURH

0.385

DCAKD_HUMAN

Dephospho-CoA kinase domain-containing protein

0.385

SYDM_HUMAN

Aspartate--tRNA ligase, mitochondrial

0.385

RT16_HUMAN

28S ribosomal protein S16, mitochondrial

0.389

EFTS_HUMAN

Elongation factor Ts, mitochondrial

0.389

RM11_HUMAN

39S ribosomal protein L11, mitochondrial

0.390

ASML_HUMAN

Probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein

0.390

GTPB3_HUMAN

tRNA modification GTPase GTPBP3, mitochondrial

0.392

SDHA_HUMAN

Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

0.397

IMDH1_HUMAN

Inosine-5-monophosphate dehydrogenase 1

0.397

PRPS1_HUMAN

Ribose-phosphate pyrophosphokinase 1

0.399

PURA1_HUMAN

Adenylosuccinate synthetase isozyme 1

0.400

Orthologs and taxonomic distribution

Eukaryota: Model Organisms
Eukaryota: Whole domain
Three domains

Orthologs found in 306 organisms (of 369)

Taxonomic distribution summary

Help

This section gives an overview of the taxonomic distribution of orthologs in representative clades. Clade names correspond to NCBI taxonomy or to the accepted consensus. Classification of each species into clade is available here

Legend:

Heatmap

Each labelled tile corresponds to a clade and is colored according to the proportion of species in the clade with at least one ortholog using the following scale:

25%

50%

75%

100%

Hover on the heatmap to see the total number of species in which orthologs were found.

Tiles framed in blue indicate the clade for which a 'focused' view is available, you can click the tile to reveal it

Labels

Label colors correspond to one of three domains of Life

Eukaryota

Archaea

Bacteria

Inparalogs

When inparalogs (genes in query species resulting from a duplication event posterior to the speciation with target species) are detected, they can be displayed under the 'See Inparalogs' button. A indicates that this protein is a predicted inparalog to the query protein, relatively to (at least) one species of this clade.

Not found in

The 'Not found in' button offers the list of species in which orthologs where not found, ordered clade by clade

See inparalogs

Orthologs not found in

	Relationship type	Query & inparalogs	Orthologs	Orthologs length	Species	Taxid		Taxonomy	Whole Taxonomy