About

How to cite OrthoInspector:

If OrthoInspector has been useful to you, consider citing:

OrthoInspector 3.0: open portal for comparative genomics.

Nevers Y, Kress A, Defosset A, Ripp R, Linard B, Thompson JD, Poch O, Lecompte O.

Nucleic Acids Research. 2018 Oct 31; epub ahead of print 10.1093/nar/gky1068 .

OrthoInspector 2.0: Software and database updates.

Linard B, Allot A, Schneider R, Morel C, Ripp R, Bigler M, Thompson JD, Poch O, Lecompte O.

Bioinformatics. 2015 Feb 1;31(3):447-8. 10.1093/bioinformatics/btu642.

OrthoInspector: comprehensive orthology analysis and visual exploration.

Linard B, Thompson JD, Poch O, Lecompte O.

BMC Bioinformatics. 2011 Jan 10;12:11. 10.1186/1471-2105-12-11.

Contacts

For any bug reports, please send a mail to : akress@unista.fr (OrthoInspector package and website support). For any questions about OrthoInspector in general or collaborations, please send a mail to : odile.lecompte@unistra.fr

Licence

The online OrthoInspector database (web site, API and predictions) is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License

Funding

We acknowledge the supports and funding from:
- Université de Strasbourg,
- Centre National de la Recherche Scientifique,
- Agence Nationale de la Recherche (ANR),
- European Grid Infrastructure,
- European Union (ELIXIR-EXCELERATE and INSTRUCT projects).

External data sources

Gene Ontology

All Gene Ontology annotations are dynamically retrieved using EBI's QuickGO API.

Interpro

Interpro domain annotations are dynamically retrieved from the dedicated EBI webservice using the corresponding protein access as a query.