Phylogenetic profile search

Find all proteins from a given species following a selected phylogenetic profile.

How to use

  1. Select a database. You can query a domain specific database (Eukaryota, Bacteria, Archaea) or cross-domain database.

  2. Select your query species. You will obtain proteins of this species as results.

  3. Define a phylogenetic profile. Select clades or species in the taxonomic tree.

Clicking on a clade/species once will select it as present, clicking twice will select it as absent. Clicking a third time will reset it.

Legend:
Unselected
Present (at least one member of the clade is present in the phylogenetic profile)
Absent (all members of the clade are absent in the phylogenetic profile)


Taxonomy

Selected phylogenetic profile:

Present in:

Absent in:

OrthoInspector website
Complex Systems and Translational Bioinformatics team - ICube laboratory
Web development by Yannis Nevers (yannis.nevers@icube.unistra.fr)